A B C D E F G H I J L M N O P Q R S T U V W X Y Z

I

id - Variable in class retrieval.DatabaseEntry3D

unique id

ImageViewer - Class in io.visualize

simple image viewer: just throw a bufferedImage in, and it will be displayed.

ImageViewer() - Constructor for class io.visualize.ImageViewer

incrementSetOfStarredZeroes(int[], int[], int[], int[]) - Method in class algorithm.matching.HungarianAlgorithm

Index - Interface in geometry

A pixel's/voxel's index in the 2D/3D array.

index - Variable in class geometry.object.SkeletonNode

the skeleton node's index in the 2D/3D image (as coordinates and index might differ from each other)

Index2Coordinates - Class in io.loader.load3D

As the voxels in the input data are not always square, the index in the 3D cube has to be used to calculate the real coordinates based on the voxels' dimensions.

Index2Coordinates() - Constructor for class io.loader.load3D.Index2Coordinates

Index2D - Class in geometry

A pixel's index in the 2D array.

Index2D(int, int) - Constructor for class geometry.Index2D

Setting x and y index.

Index3D - Class in geometry

A voxel's index in the 3D array.

Index3D(int, int, int) - Constructor for class geometry.Index3D

Setting x, y, and z index.

initBufferedImage() - Method in class io.visualize.MatchingViewer

set width and height of the buffered image.

initG(int[][][]) - Static method in class io.loader.load3D.SaitoToriwakiDistanceTransform

INITIAL_SIZE - Static variable in class io.loader.load2D.contours.Contour

initImage(BufferedImage) - Static method in class io.visualize.SkeletonToBufferedImage

set image completely to background color.

initStars(float[][], int[], int[]) - Method in class algorithm.matching.HungarianAlgorithm

init starred zeroes for each column find the first zero if there is no other starred zero in that row then star the zero, cover the column and row and go onto the next column

innerContours - Variable in class io.loader.load2D.contours.ContourTracer

input - Variable in class gui.Matching3DGui

intdivint(double, double) - Static method in class io.loader.load3D.DistanceTransform3D

Deprecated.

InvalidConfigParameterException - Exception in exception

This exception is thrown if a invalid config parameter value was given.

InvalidConfigParameterException() - Constructor for exception exception.InvalidConfigParameterException

Throw an empty exception

InvalidConfigParameterException(String) - Constructor for exception exception.InvalidConfigParameterException

Throw an exception with the specified message

InvalidConfigParameterException(String, String) - Constructor for exception exception.InvalidConfigParameterException

Throw an exception.

InvalidSkeletonException - Exception in exception

this exception is thrown if something weird was found in the skeleton data.

InvalidSkeletonException() - Constructor for exception exception.InvalidSkeletonException

InvalidSkeletonException(String) - Constructor for exception exception.InvalidSkeletonException

InvalidWeightFunctionGivenException - Exception in exception

this exception is thrown if an invalid weight function was given to the matching algorithm.

InvalidWeightFunctionGivenException(String) - Constructor for exception exception.InvalidWeightFunctionGivenException

InvalidWeightFunctionGivenException() - Constructor for exception exception.InvalidWeightFunctionGivenException

io.loader - package io.loader

Contains all classes used to load 2D/3D data from the input files.

io.loader.load2D - package io.loader.load2D

Contains all classes used to load a 2D skeleton from the input files.

io.loader.load2D.contours - package io.loader.load2D.contours

Containing all data structures to represent contours.

io.loader.load3D - package io.loader.load3D

Contains all classes needed to load a 3D-skeleton.

io.loader.shared - package io.loader.shared

Package containing all classes needed to load 2D skeletons as well as 3D skeletons.

io.out - package io.out

Classes needed to save skeletons to the file system.

io.visualize - package io.visualize

Classes needed to visualize/show skeletons and skeleton matching results.

ip - Variable in class io.loader.load2D.contours.ContourTracer

isEdgeNeighbor(Index, Index) - Static method in class io.loader.load2D.NeighborSkeletonNodes2D

Check if two indices are edge neighbors or not.

isEdgeNeighbor(SkeletonNode, SkeletonNode) - Static method in class io.loader.load3D.NeighborSkeletonNodes3D

Check if two skeleton nodes are edge-connected.

isEndNode - Variable in class geometry.object.SkeletonNode

holds the information if this skeleton node is an end node

isEndNode() - Method in class geometry.object.SkeletonNode

check if this skeleton node is an end node.

isNeighbor(Coordinates) - Method in interface geometry.Coordinates

check if the coordinates specified by the parameter are neighbor coordinates.

isNeighbor(Coordinates) - Method in class geometry.Coordinates2D

isNeighborOf(Point, SkeletonNode) - Method in class io.loader.load2D.SkeletonParser2D

check if the specified skeleton node is in the 3x3 neighborhood of the specified contour point.

isReordered() - Method in class algorithm.Matching2D

Test if the two skeletons were reordered in order to execute the algorithm.

isSkeleton(int) - Static method in class io.loader.load2D.NeighborSkeletonNodes2D

check if the specified color code is encoding a skeleton node

isSkeleton(int) - Method in class io.loader.load2D.SkeletonParser2D

check if the specified color code is encoding a skeleton node

isSkeletonNode - Variable in class geometry.object.SkeletonNode

holds the information if this skeleton node is a true skeleton node, that is, no end node

isSkeletonNode() - Method in class geometry.object.SkeletonNode

check if this skeleton node is a true skeleton node, that is, it's neither end node nor junction node.

isSurfaceNeighbor(SkeletonNode, SkeletonNode) - Static method in class io.loader.load3D.NeighborSkeletonNodes3D

Check if two skeleton nodes are surface connected.

isVisited(boolean[][], SkeletonNode) - Static method in class io.loader.load2D.SampleParts2D

Test if the speicifed skeleton node has been visited.

isVisited(boolean[][][], SkeletonNode) - Static method in class io.loader.load3D.SampleParts3D

Check if the specified node has already been visited.