Package io.loader.load3D

Contains all classes needed to load a 3D-skeleton.

See:
Description

Class Summary

DistanceTransform3D	Deprecated. - use SaitoToriwakiDistanceTransform instead
Index2Coordinates	As the voxels in the input data are not always square, the index in the 3D cube has to be used to calculate the real coordinates based on the voxels' dimensions.
NeighborSkeletonNodes3D	Additional functionalities to check the neighborhood of skeleton nodes.
NodeArea3D	A 3D node area.
SaitoToriwakiDistanceTransform	An implementation of the 3D distance transform algorithm proposed in: T.
SampleParts3D	Sample single skeleton branches in 3D data.
SkeletonParser3D	Load a skeleton from the input data.

Package io.loader.load3D Description

Contains all classes needed to load a 3D-skeleton.

To load one 3D skeleton, 4 input files are needed:

• The raw binary data containing the shape's volume, where the shape is marked by a value bigger than 0, the background is labeled with 0.
• An info file for the raw data, containing meta information about the shape's volume, for example:

                          
                          Width 123
                          Height 95
                          Depth 379
                          WidthDim 1.46875
                          HeightDim 1.46875
                          DepthDim 1.00134
                          MinVal ^@
                          MaxVal ^@
                          BitsUsed 16
                          
                  

• The raw data containing the shape's skeleton, where the skeleton is marked by a value bigger than 0, the background is labeled with 0.
• An info file for the skeleton raw data, containing meta information about the shape's skeleton, as shown above.