A B C D E F G H I J L M N O P Q R S T U V W X Y Z

D

database - Variable in class gui.DatabaseAccessGUI

the name of the database

database - Variable in class main.AutomaticMatching

database - Variable in class main.AutomaticRetrieval

DatabaseAccessGUI - Class in gui

Super class for GUIs that need access to the entries in the database.

DatabaseAccessGUI(String) - Constructor for class gui.DatabaseAccessGUI

Setting the database name

DatabaseEntry - Class in retrieval

A one-to-one mapping of a row in the database to a java class.

DatabaseEntry(String, String, String) - Constructor for class retrieval.DatabaseEntry

Constructor.

DatabaseEntry3D - Class in retrieval

Holding the information about a 3D data set, as used in Matching3DGui .

DatabaseEntry3D(int, String, String, String, String, String, String, String, String, String) - Constructor for class retrieval.DatabaseEntry3D

Constructor, create a new database entry instance.

debug2DArray(double[][]) - Static method in class utils.ArrayUtilities

get a debug string displaying two dimensional arrays

debug2DArray(float[][]) - Static method in class utils.ArrayUtilities

get a debug string displaying two dimensional arrays

debug2DArray(int[][]) - Static method in class utils.ArrayUtilities

get a debug string displaying two dimensional arrays

defaultOrder - Static variable in class config.Constants

deleteBadMatchingsByAngleMean - Static variable in class config.Constants

deleteBadMatchingsByAngleMeanAndStd - Static variable in class config.Constants

deleteBadMatchingsByMean - Static variable in class config.Constants

deleteBadMatchingsByMeanAndStd - Static variable in class config.Constants

deleteBadMatchingsByMedian - Static variable in class config.Constants

deleteSpuriousBranches(SkeletonObject, Config) - Static method in class io.loader.shared.Preprocessor

Delete all branches that emanate from an end node and are shorter than the parameter listed in the configuration.

deleteUnconnectedComponents() - Method in class geometry.object.SkeletonGraph

If the skeleton graph is not connected, the unconnected parts are deleted.

deleteUnconnectedComponents(SkeletonGraph) - Method in class io.loader.shared.SkeletonParser

In some cases, the skeletons might not be connected (that is, there are "holes" in the skeleton which makes the sampling of the whole paths impossible).

deleteUnnecessaryBranches(SkeletonGraph) - Method in class io.loader.shared.SkeletonParser

Deletes short branches from the skeleton, based on their length.

depth - Variable in class geometry.object.SkeletonObject

only used in 3D, always 0 for 2D

depthDim - Variable in class io.loader.load3D.SkeletonParser3D

the voxelsÄ z dimension

Dimensions - Interface in geometry

Hold the information about the dimensions of pixels/voxels in a skeleton, as they might be non-unit pixels/voxels

dimensions - Variable in class geometry.object.SkeletonObject

the dimensions for each pixel/voxel in this skeleton object

Dimensions2D - Class in geometry

Dimensions for 2D pixels.Returning default 0 for z-coordinate

Dimensions2D(double, double) - Constructor for class geometry.Dimensions2D

Setting width and height dimension.

Dimensions3D - Class in geometry

Hold the information about the dimensions of voxels in a skeleton, as they might be non-unit voxels

Dimensions3D(double, double, double) - Constructor for class geometry.Dimensions3D

Setting all dimensions.

DisplaySkeletonPaths - Class in test.io

save a series of images that display single skeleton paths, all emanating from one given end node.

DisplaySkeletonPaths() - Constructor for class test.io.DisplaySkeletonPaths

DistanceMap - Interface in geometry.object

A shape's distance map holds for every node in the shape the information about the distance from the node to the shape contour.

distancemap - Variable in class geometry.object.DistanceMap2D

distance map, holding distance to the contour from node (x,y) in index [x][y]

distancemap - Variable in class geometry.object.DistanceMap3D

distance map, holding the distance to the contour from node (x,y,z) in index [x][y][z]

distancemap - Variable in class geometry.object.SkeletonObject

the object's distance map

DistanceMap2D - Class in geometry.object

A 2-dimensional distance map

DistanceMap2D() - Constructor for class geometry.object.DistanceMap2D

DistanceMap3D - Class in geometry.object

A 3-dimensional distance map.

DistanceMap3D() - Constructor for class geometry.object.DistanceMap3D

DistanceTransform2D - Class in io.loader.load2D

get the distance transform DT of a binary shape image.

DistanceTransform2D() - Constructor for class io.loader.load2D.DistanceTransform2D

DistanceTransform3D - Class in io.loader.load3D

Deprecated. - use SaitoToriwakiDistanceTransform instead

DistanceTransform3D() - Constructor for class io.loader.load3D.DistanceTransform3D

Deprecated.

DistanceTransform3DTest - Class in test.io

Test the creation of a 3D distance transform.

DistanceTransform3DTest() - Constructor for class test.io.DistanceTransform3DTest

dontUseDenominator - Static variable in class config.Constants

dontUseDenominator - Variable in class gui.Matching3DGui

double2float(double[][]) - Static method in class utils.ArrayUtilities

convert double[][] to float[][]